miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|18429910|gb|BM425972.1|BM425972 CGGCCGCGGCCGGGGGAAGGCGGCTCCCGCCGGGCCCAGCGCGGCGGCGGATGGCGGGGGGGCCGCGCCCGGCGGGGGCC
GGCGGGGGCGCCCGTTGAGCGGCGGCGGCGGAGCGATGCCGGGGGGCCCGGCGCGGCGGGGCGCGCCCGCGGGGCCATGA
GGGCGGGCTCCGGCCATGGCCCATGGCAGCGCCGCGGTCATGCTGAAGTGCGTGGTGGTGGGGGACGGCGCCGTGGGCAA
GACGTGCCTGCTGATGAGCTACGCCAACGACGCCTTCCCTGAGGAGTACGTGCCCACCGTCTTCGACCACTACGCAGTCA
GCGTTACCGTGGAGGGCAAGCAGTACCTGCTGGGGCTCTACGACACCGCCGGGCAGGAAGACTATGACCGTCTGAGACCT
TTATCTTATCCTATGACCGATGTCTTCCTTATCTGCTTCTCAGTGGTAAACCCTGCTTCATTTCAAAACGTGAAGGAAGA
ATGGGTACCGGAGTTGAAGGAATATGCACCTAATGTTCCTTTTTTACTAGTAGGAACACAGANNNATCTTCGTGATGACC
CCAAAACTCTGGCAAGATTGAATGA




Most similar to sp|Q9JJL4|RHOQ_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9JJL4|RHOQ_RAT Rho-related GTP-binding protein RhoQ OS=Rattus
          Length = 205

 Score =  264 bits (675), Expect = 3e-70
 Identities = 127/134 (94%), Positives = 129/134 (96%)
 Frame = +2

Query: 182 HGSAAVMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVEGKQYLLGLY 361
           HG  A+MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV GKQYLLGLY
Sbjct: 3   HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62

Query: 362 DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLVGTQ 541
           DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLL+GTQ
Sbjct: 63  DTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQ 122

Query: 542 XXLRDDPKTLARLN 583
             LRDDPKTLARLN
Sbjct: 123 IDLRDDPKTLARLN 136